PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN22140.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 290aa    MW: 33210.4 Da    PI: 9.5336
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN22140.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-10110157355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r h  +Er+RR+++ +++  L   +P +     kK +K+ ++++Av Y+k+Lq
  KHN22140.1 110 RVHILAERKRREELTKSIVALSATIPGL-----KKTDKVNVVREAVSYVKQLQ 157
                 56999***********************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.202107156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-14107172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.45E-9108161No hitNo description
PfamPF000102.7E-8111157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-13111169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-11113162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MEDSRMDLLS QWEMGDDDFF NNQIHMISFT EEKSSKDMIF QQAFFSSSSS SSSLQSNLKP  60
CSPFPTGGYV LSFDKPVVEP LYPKKHHSPK SLAQSQYCVE PKAFPRTRPR VHILAERKRR  120
EELTKSIVAL SATIPGLKKT DKVNVVREAV SYVKQLQERV KELENQKRKE SMNSIILNKH  180
RPLSINDQAT HGFVDVNEEL LEVKVTVLDK EVLIGIYCEK QRQRLLKILS LLDNLHLSIT  240
HTSVLPFGTS TLKITIIAQM MKVISMTSQN LWNVERQLIG IMNSVLLEKH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115120ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014617225.11e-155PREDICTED: transcription factor bHLH25-like, partial
TrEMBLA0A0B2QKZ20.0A0A0B2QKZ2_GLYSO; Transcription factor bHLH25
STRINGGLYMA09G38241.11e-164(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1872846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-38bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]